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http://www.ampcinc.com

AMPC, Inc. manufactures and markets protein ingredients.

http://www.realtime.net/anr/aminoacd.html

Austin Nutrition ResearchContains overview and discussion of amino acids

http://www.tulane.edu/%7Ebiochem/med/med.htm

Biochemistry from Tulane including amino acids, protein, immunoglobulins, and amyloidoses

http://biocyc.org/

BioCyc is a collection of Pathway/Genome Databases. Each database in the BioCyc collection describes the genome and metabolic pathways of a single organism, with the exception of the MetaCyc database, which is a reference source on metabolic pathways from many organisms

http://www.thebiogrid.org/

Biogrid are webs of interconnected proteins and genes that keep cells running is listed here. Each entry maps the liaisons of a particular protein or gene and summarizes the experimental evidence for each association.

http://tc.cornell.edu/reports/NIH/resource/CompBiology Tools

Cornell Theory Center has a modeling of proteins and biomolecules with software tools.

http://natural.salk.edu/CREB/

CREB Target Gene Database This database is dedicated to catogerize CREB target genes in a comprehensive and easy-to-search way. We have used a multi-layered approach to predict, validate and chracterize CREB target genes. For each gene, we try to provide the following information:

http://www.wellcome.ac.uk/en/genome/geneticsandsociety/hg13f012.html

The Crick Papers of the Wellcome Trust, explores the papers from Francis Crick's archive. Co-discovered the double helix and helped shepherd the field of molecular biology through its youth.

http://dis.embl.de/

DisEMBL is a site which looks at intrinsic protein disorder. There is information of different proteins and ability to input data.

http://www.dnai.org/index.htm

DNA Interactive uses graphics to draw students into DNA. Shows DNA implications and how it solves forensic problems.

http://www.mrc-lmb.cam.ac.uk/genomes/dolop/

DOLOP is a database of bacterial lipoproteins. Discusses the proteins and the roles and source of lipoproteins.

http://cytokine.medic.kumamoto-u.ac.jp/

Cytokine Family Database is a collection of EST (Expressed Sequence Tag) records of cytokines deposited int he NCBI GenBank.

http://www.history.nih.gov/exhibits/nirenberg/

Deciphering the Genetic Code hasinformation on this DNA code breaker.

http://www.ebi.ac.uk/thornton-srv/databases/pdbsum/

EBI sponsors the PDBsum, a database of the known 3D structures of proteins and nucleic acids.

http://www.cbil.upenn.edu/EPConDB/

EPConDB has a database of transcribed sequences for elements on the PancChip. Has transcripts for gene quickly.

http://www.ebi.ac.uk/GenomeReviews/

European Bioinformatics Institute is to provide an up-to-date, standardised and comprehensively annotated view of the genomic sequence of organisms with completely deciphered genomes.

http://www.exactantigen.com/

ExactAntigen provides a comprehensive gene-specific and species-specific information resource for reagents (antibodies, ELISA, siRNA, recombinant proteins, chemicals, and tissue arrays), researchers, and patents.

http://www.expasy.ch/swissmod/SM_3DCrunch.html

Folded and filed has structures of protein sequences and three-dimensional structures from experimental data.

http://www.informatics.jax.org/mgihome/GXD/aboutGXD.shtml

The Gene Expression Database is a community resource for gene expression information from the laboratory mouse. GXD stores and integrates different types of expression data and makes these data freely available in formats appropriate for comprehensive analysis. There is particular emphasis on endogenous gene expression during mouse development.

http://ghr.nlm.nih.gov/ghr/page/Home

Genetics Home Reference is the National Library of Medicine's web site for consumer information about genetic conditions and the genes or chromosomes responsible for those conditions. The resources on this site should not be used as a substitute for professional medical care or advice. Users seeking information about a personal genetic disease, syndrome, or condition should consult with a qualified healthcare professional.

http://www.cmbi.ru.nl/GeneSeeker/

The GeneSeeker helps narrow the list of potential culprits in gene problems. The search engine combs 10 databases that contain information on gene location, activity, and effects including Online Mendelian Inheritance in Man, Swiss-Prot, and the Mouse Genome Database.

http://www.bio.davidson.edu/projects/GCAT/gcat.html

Genome Consortium for Active Teaching profiles more than 20,000 sporadic and inherited p53 mutations reported in the literature. Users can find out how a specific mutation alters the DNA, its prevalence in difference cancers, and other information. Entries also explain how more than 400 of these genetic flaws undermine the protein's function.

http://discover.nci.nih.gov/

Genomics and Bioinformatics Group web site offers useful bioinformatic program packages, microarray data analysis information, and molecular databases for genomic and proteomic research.

http://www.chem.duke.edu/

Geometric Aspects of Protein Structure and Function reviews this aspect.

http://bioinfo.nist.gov:8080/examples/servlets/index.html

Human Mitochondrial Protein Database provides comprehensive data on mitochondrial and human nuclear encoded proteins involved in mitochondrial biogenesis and function. This database consolidates information from SwissProt, LocusLink, Protein Data Bank (PDB), GenBank, Genome Database (GDB), Online Mendelian Inheritance in Man (OMIM), Human Mitochondrial Genome Database (mtDB), MITOMAP, Neuromuscular Disease Center and Human 2-D PAGE Databases. The mitochondrion plays a central role in cellular metabolism, and evidence of mitochondrial involvement in a number of different human diseases is increasing. This database is intended as a tool not only to aid in studying the mitochondrion but in studying the associated diseases.

http://www.pdg.cnb.uam.es/UniPub/iHOP/

IHOP is a site which lets you search for the gene or synonym and get the physiology, interaction and/or phenotype

http://www.hapmap.org/

International HapMap Project is to develop a haplotype map of the human genome, the HapMap, which will describe the common patterns of human DNA sequence variation. The HapMap is expected to be a key resource for researchers to use to find genes affecting health, disease, and responses to drugs and environmental factors. The information produced by the Project will be made freely available.

http://www.informaxinc.com

InforMax is bioinformatics made easy. Has information regarding data management, mapping, protein and nucleic acid sequence analysis, data storage.

http://www.pmsfoods.com

Legacy Foods is a distributor of textured soy protein products. Products and contact information available.

http://www.sanger.ac.uk/Software/Rfam/mirna/

MiRNA Registry is a registry with aims to
* to provide miRNA gene hunters with unique names for novel miRNA genes prior to publication of results
* to provide a searchable database of published miRNAs

http://bpp.nci.nih.gov/

NCI-Frederick has database catalogs of more than 1400 blook proteins isolated. These are useful for diagnostic and prognostic biomarkers.

http://hembase.niddk.nih.gov/

NIDDK Hembase was developed to provide worldwide access to those genetic-based studies performed by scientists in the Molecular Biology and Genetics Section, Molecular Medicine Branch, Division of Intramural Research, National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK). This project represents the shared goal of several individuals and groups (credits) interested in disseminating genomic information on the World Wide Web.

http://www.onlinehealthresources.com/Nutrition/

OnLine Health Resoruces - directory of Nutrition related websites.

http://www.pandora.cs.huji.ac.il/

Pandora is a protein annotation diagram oriented analysis. It is a keyword-based analysis of protein sets by integration of annotation sources.

http://www.patrocles.org/

Patrocles is a database of polymorphic miRNA-target interactions. This database gathers SNPs, or one letter changes in DNA, that create or eliminate miRNA attachment swites. The site houes data on mice and humans.

http://www.biochem.abdn.ac.uk/%7Epgray/home_page.html

Peter Gray's Page which includes information on Protein Structure and Sequence plus a number of modelling databases.

http://www.plasmaproteomedatabase.org/

Plasma Proteome Database is a comprehensive resource for all human plasma proteins along with their isoforms. The database includes information pertaining to isoform specific expression, disease, localization, post translational modification and single nucleotide polymorphism. The information provided in this database is through manual annotation done by exhaustive literature research.

http://www.uark.edu/depts/cheminfo/uarkchem/

Protein Chemistry Research

http://www.rcsb.org

Protein Data Bank is the single international repository for the processing and distribution of 3-D macromolecular structure data primarily determined experimentally.

http://www.public.iastate.edu/%7Epedro/p_families.html

Protein Familiesincludes barnase, cytochrome P450, GCRDb, globin gene server, glucoamylase, histo, myoglobin hyperbase, pkcdd

http://www.proteinscience.org/

Protein Science is a publication on-line regarding this science..

http://proteindbs.rnet.missouri.edu/

ProteinDBS is a protein database search engine to support protein global-to-global tertiary structure matching. This collection has more than 50,000 protein structures provides a speedy way to contrast similar molecules. Protein DBS lets you enter a Protein DataBank ID number or file of coordinates for a molecules.

http://rdp.cme.msu.edu/

Ribosomal database Project II provides ribosome related data services to the scientific community, including online data analysis, rRNA derived phylogenetic trees, and aligned and annotated rRNA sequences.

http://www.rna.icmb.utexas.edu/

RNA Web Site hascompaarative structure models, nucleotide frequency and conservation information, sequence and structure data, data access systems for RNA.

http://www.newsilkfood.com/

SilPro, Inc. is a product, a protein, which is purported to solve cholesterol, weight, energy and stamina problems.

http://bioinformatics.org/sms2/

SMS s a collection of JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. It is commonly used by molecular biologists, for teaching purposes, and for program and algorithm testing.

http://www-snorna.biotoul.fr/

snoRNABase is a comprehensive database of human H/ACA and C/D box snoRNAs.

http://subviral.med.uottawa.ca/cgi-bin/home.cgi?oldURL=1

Subviral RNA Database has nucleotide sequences for viroids and related solo RNA molecules.

http://www.elmhurst.edu/~chm/vchembook/560aminoacids.html

Virtual Chembook has information on amino acids, structures, review, reactions and proteins. The molecular structures are shown.

http://www-gsd.lbl.gov/VISTA/index.shtml

VISTA is a comprehensive suite of programs and databases for comparative analysis of genomic sequences. There are two ways of using VISTA - you can submit your own sequences and alignments for analysis (VISTA servers) or examine pre-computed whole-genome alignments of different species (VISTA browser).

http://sfold.wadsworth.org/index.pl

Wadsworth Center has software for statistical folding and rational design of nucleic acids.

Updated: Monday, August 27, 2007.